AQA A-Level Biology Paper 1, June 2022: Question 5

9 marks · Medium difficulty · Short Answer

Define quaternary structure, explain how two enzymes with different amino acid sequences can catalyse the same reaction, describe control tubes for this investigation, and state conclusions from Figure 8.

Practise this question

Question

A four-part question about two enzymes P and Q with quaternary structure. Part 05.1 asks to define quaternary structure. Part 05.2 asks to explain how enzymes with different amino acid sequences catalyse the same reaction. Part 05.3 asks to describe control tubes in an investigation of enzyme activity at pH 8.4 and 7.5. Part 05.4 asks for three conclusions from Figure 8, which displays two line graphs showing concentration of substrate against time for a control, enzyme P, and enzyme Q at pH 8.4 and pH 7.5.
Question text

05 Two enzymes, P and Q, are proteins with quaternary structure which catalyse the

same reaction, but they have different amino acid sequences.

05.1 Define the quaternary structure of a protein.

[1 mark]

05.2 Explain how two enzymes with different amino acid sequences can catalyse the

same reaction.

[2 marks]

Scientists investigated the effect of pH 8.4 and pH 7.5 on the activity of enzymes

P and Q.

Figure 8 shows their results.

Figure 8

05.3 Describe what the scientists should place in the control tubes in this investigation.

[3 marks]

05.4 Give three conclusions you can make from Figure 8.

[3 marks]

Mark scheme

Show the mark scheme Mark scheme detailing points for parts 05.1 through 05.4. Part 05.1 accepts more than one polypeptide. Part 05.2 accepts active sites having similar or identical tertiary structures or amino acid sequences leading to enzyme-substrate complex formation. Part 05.3 accepts buffer, substrate, and denatured enzyme/no enzyme/water. Part 05.4 lists various accepted conclusions regarding enzyme activities at pH 8.4 and 7.5, control behavior, and reaction endpoints.

Question Marking Guidance Mark Comments

More than 1 polypeptide; 1 Ignore prosthetic

(AO1) group OR named

05.1 interactions between

chains, eg disulfide

bridge

1. (Both) active sites have similar/identical tertiary 2 1. Ignore shape for

structures tertiary structure

(2 x

OR AO1) 1. Accept (both) have

(Both) active sites have identical amino acid active sites that are

sequences; complementary to

05.2 different parts of the

2. (So) form enzyme-substrate complexes (with the substrate;

same substrate);

1. Accept attach/bind

for complementary

2 Accept E-S for

enzyme-substrate

Ignore temperature

1. Same volume of (each) buffer/pH solution; 3

2. Same concentration/mass of substrate (at start); (3 x Ignore amount for

AO3) volume, concentration

3. Same concentration/mass of denatured

enzyme; OR mass

Accept pH solution for

If no marks gained, accept for 1 mark, buffer

05.3

Buffer and substrate and denatured enzyme 3. Accept description

OR of denatured, eg

boiled

Buffer and substrate and no enzyme

OR

– A-LEVEL BIOLOGY – –

Buffer and substrate and water;

1. Both/P and Q (are) active at pH 8.4; 3 max Do not mark across all

(3 x three conclusions

2. P is (equally/most) active at both pHs

AO3) Accept catalyse OR

OR

Q is less active than P at both pHs breakdown (substrate)

OR OR hydrolyse

P not affected by pH (change) (substrate) OR digest

OR (substrate) OR cause

16 reaction for

Q is affected by pH (change);

active/reaction

3. Q is denatured/not active at pH 7.5 Ignore works better

OR for active/reaction

Q is less active than the control at pH 7.5;

05.4 Ignore reference to

4. Reaction occurs without enzyme(s) optimum

OR 3. Accept description

Reaction occurs in the control; of denatured

5. All (reactions) reach same end (point) 5. Accept broken

down OR catalysed

OR

OR digested OR

Substrate is not used up; hydrolysed for used

(up)

5. Accept does not

reach zero for not

used up

How to answer it

Enzymes and Protein Structure Study Guide

What this question tests

This question assesses your understanding of protein structure (specifically quaternary organization), how enzymes with different amino acid sequences can catalyze the same reaction via similar active sites, how to design a valid biological control experiment, and how to accurately interpret graphical data from enzyme kinetics investigations.

Question 05.1

Defining Quaternary Structure

Define the quaternary structure of a protein. [1 mark]

✅ Correct Answer

More than one polypeptide (chain).

💡 Key Knowledge

  • Proteins can consist of a single polypeptide (up to tertiary structure) or multiple polypeptide chains (quaternary).
  • May include associated non-protein groups (prosthetic groups), though definition focuses on multiple chains.

❌ Common Errors

  • Mentioning specific bonds like "disulfide bridges" or "hydrogen bonds" without stating multiple polypeptide chains.
  • Confusing tertiary structure folding with multi-subunit assembly.
Mark scheme note: Ignore prosthetic groups or named interactions between chains (e.g., disulfide bridges). Must reference multiple polypeptides.
Question 05.2

Enzyme Catalysis & Sequence Variation

Explain how two enzymes with different amino acid sequences can catalyse the same reaction. [2 marks]

✅ Correct Answer

  1. (Both) active sites have similar/identical tertiary structures (or identical amino acid sequences at the active site);
  2. (So) form enzyme-substrate complexes with the same substrate.

🧠 Exam Technique

This is a 2-mark point requiring cause-and-effect. Mark point 1 explains why they bind the same substrate (active site structure), and Mark point 2 links this to function (forming enzyme-substrate complexes).

❌ Common Errors

Students often state that "the whole protein has the same shape." Examiners penalize this because the overall amino acid sequences are different—only the active site region needs to be conserved/complementary.

Mark scheme note: Accept "active sites are complementary to the substrate". Ignore shape for general tertiary structure.
Question 05.3

Designing Enzyme Controls

Describe what the scientists should place in the control tubes in this investigation. [3 marks]

✅ Correct Answer

  1. Same volume of (each) buffer / pH solution;
  2. Same concentration / mass of substrate (at start);
  3. Same concentration / mass of denatured enzyme (OR buffer and substrate and water / no enzyme);

💡 Key Knowledge

A control in an enzyme experiment proves that the decrease in substrate concentration is due to the active enzyme, not spontaneous breakdown or effects of other tube components like the buffer.

❌ Common Errors

Forgetting to account for the presence of protein mass in the active enzyme tubes. Using a denatured enzyme ensures the total protein concentration/viscosity remains consistent with the test tubes.

Mark scheme note: If no marks gained, allow 1 mark for mentioning buffer, substrate, and denatured enzyme (or water/no enzyme) together. Ignore temperature and amounts.
Question 05.4

Interpreting Graphical Data

Give three conclusions you can make from Figure 8. [3 marks]

✅ Correct Answer (Choose any 3)

  • Both / P and Q are active at pH 8.4;
  • P is (equally/most) active at both pHs OR Q is less active than P at both pHs OR P not affected by pH change / Q is affected by pH change;
  • Q is denatured / not active at pH 7.5 OR Q is less active than control at pH 7.5;
  • Reaction occurs without enzyme(s) / reaction occurs in the control;
  • All (reactions) reach same end point OR substrate is not used up.

🧠 Exam Technique

Do not "mark across all three conclusions" in a way that contradicts itself. Read the graphs carefully comparing the dashed line (P), grey line (Q), and solid line (Control) across both pH 8.4 and pH 7.5 grids.

❌ Common Errors

Using vague phrasing like "enzyme works better." Be precise: reference specific pH values, specific enzymes (P or Q), or comparison against the control line.

Mark scheme note: Accept catalyst, breakdown, hydrolyse, digest, or cause reaction for active/reaction. Ignore references to "optimum".

Topics

Biology · Practical skills · 3.1 Biological molecules · Experimental design · Data analysis

Question and mark scheme from the AQA A-Level Biology examination, Paper 1, June 2022. QuestionVault is an independent revision resource; questions remain the copyright of the awarding body.