AQA A-Level Chemistry Paper 2, 2019: Question 9

4 marks · Medium difficulty · State/Explain/Describe

Answer questions on two-dimensional thin-layer chromatography (TLC) of a hydrolysed protein, including the reagent for hydrolysis, locating agent, deducing the number of amino acids, and the need for two solvents.

Practise this question

Question

Question 09 describes two-dimensional thin-layer chromatography (TLC) of a hydrolysed protein. Figure 2 shows a rectangular TLC plate with the original spot on the bottom-left baseline. Solvent 1 moved vertically upwards, showing 3 spots (open circles). The plate was rotated 90 degrees anticlockwise and developed horizontally with Solvent 2, revealing 7 grey-filled spots separated across the plate. Sub-questions 09.1 to 09.4 ask for a suitable reagent for protein hydrolysis, how the amino acid spots were visualised, the minimum number of amino acids present, and why two solvents were needed.
Question text

09 This question is about thin-layer chromatography (TLC).

• A protein was hydrolysed to form a mixture of amino acids.

• A spot of this mixture was added to a TLC plate and the plate placed vertically in a

small volume of solvent 1.

• When the solvent front reached nearly to the top of the plate, the plate was

removed and allowed to dry.

• The plate was turned anticlockwise through 90° and placed vertically in a small

volume of solvent 2.

• When the solvent front reached nearly to the top of the plate, the plate was again

removed and allowed to dry.

• Figure 2 shows the final TLC plate.

Figure 2

09.1 Suggest a suitable reagent for the hydrolysis of a protein.

[1 mark]

09.2 Suggest how the positions of the amino acids on the TLC plate were located.

[1 mark]

09.3 Deduce the minimum number of amino acids present in the original mixture.

[1 mark]

09.4 Suggest why it was necessary to use two different solvents.

[1 mark]

Mark scheme

Show the mark scheme Mark scheme for Question 09. 09.1 accepts Conc HCl (or conc sulfuric/conc strong alkalis, or 5M or higher) [1 mark]. 09.2 accepts ninhydrin, ultraviolet light, or iodine vapour [1 mark]. 09.3 awards 1 mark for 7 or seven. 09.4 awards 1 mark for stating that some amino acids did not separate or dissolve in the first/either solvent, or had the same Rf value/affinity in the first solvent.

Question Answers Additional Comments/Guidelines Mark

Conc HCl Allow concentrations of 5M or higher

09.1 1

Allow conc sulfuric or conc strong alkalis

09.2 Using ninhydrin or ultraviolet light Allow I2 (vapour) 1

G 09.3 7 or seven 1

Some of the amino acids did not separate/dissolve with the first/either

solvent Not amino acids have different Rf values in 1

09.4 OR different solvents

Some amino acids have the same Rf value or have the same affinity

with the first/either solvent

How to answer it

AQA A-Level Chemistry • Organic Analysis & Biochemistry

Two-Dimensional Thin-Layer Chromatography (TLC) of Amino Acids

What this question tests

  • Conditions for protein hydrolysis: Breaking peptide bonds to yield free amino acids using strong acid.
  • Locating agents in TLC: Visualising colourless organic compounds (specifically amino acids) on a chromatogram.
  • Interpreting 2D chromatography: Counting resolved spots after development in two perpendicular directions.
  • Principles of chromatographic separation: Understanding why mixtures require two distinct mobile phases with different polarities to achieve full resolution.

Question 09.1

Suggest a suitable reagent for the hydrolysis of a protein. [1 mark]

✅ Correct Answer

Concentrated hydrochloric acid (or conc. HCl )

1 Mark: Awarded for naming or writing the formula with concentration specified (e.g. conc HCl, HCl ≥ 6 mol dm⁻³, conc H₂SO₄, or conc strong alkali like conc NaOH).

💡 Key Knowledge

Peptide (amide) bonds are relatively stable and require harsh conditions to hydrolyse completely into individual amino acids:

  • Standard lab conditions: 6 mol dm⁻³ HCl (conc HCl), heated under reflux (often ~110 °C for 24 hours).
  • Concentrated aqueous strong bases (e.g., conc NaOH) are also acceptable alternatives.

❌ Common Errors

  • Writing just HCl or hydrochloric acid without specifying concentrated or giving a concentration ≥ 5 mol dm⁻³. Dilute acid is too slow to achieve complete hydrolysis.
  • Suggesting water alone ( H₂O ) — water is a reactant, but it is not a suitable laboratory reagent on its own as uncatalysed hydrolysis is extremely slow.

🧠 Exam Technique

When asked for reagents that hydrolyse proteins, polyesters, or polyamides, always be precise with concentration and conditions. Writing "conc." takes one second and prevents losing an easy mark.

Question 09.2

Suggest how the positions of the amino acids on the TLC plate were located. [1 mark]

✅ Correct Answer

Any one of the following:

  • Using ninhydrin (spray/reagent)
  • Using ultraviolet (UV) light
  • Using iodine vapour (I₂)
1 Mark: Correctly identifying a valid locating method for amino acids.

💡 Key Knowledge

Amino acids are colourless compounds and are invisible on silica plates under ordinary visible light:

  • Ninhydrin: Reacts with primary amino groups to form an intense purple/blue complex (Ruhemann's purple).
  • UV Light: Many TLC plates contain a fluorescent indicator; spots appear dark where amino acids quench the fluorescence.

❌ Common Errors

  • Vague answers like "shine a light on it" without specifying ultraviolet (UV).
  • Confusing chemical tests: suggesting Biuret reagent (which tests for peptide bonds in unhydrolysed proteins, not free individual amino acids).

🧠 Exam Technique

Memorise "ninhydrin" specifically for amino acid TLC. It is the examiner's favourite answer and applies specifically to amino acid detection.

Question 09.3

Deduce the minimum number of amino acids present in the original mixture. [1 mark]

✅ Correct Answer

7 (or seven )

1 Mark: Exactly 7 deduced from the final positions shown in Figure 2.

📐 How to Count (Figure 2 Analysis)

Count every separate final spot (grey circles) visible after running solvent 2:

  • Row 1 (top level from solvent 1): 1 grey spot
  • Row 2 (middle-upper level): 2 grey spots
  • Row 3 (middle-lower level): 2 grey spots
  • Bottom line (origin line of solvent 1): 2 grey spots (these amino acids were insoluble or had zero Rf in solvent 1, but moved across in solvent 2)
  • Total distinct spots: 1 + 2 + 2 + 2 = 7 spots

❌ Common Errors

  • Counting 4: Only counting the spots that moved in Solvent 1 (hollow spots) or counting rows.
  • Counting 5: Forgetting to count the 2 grey spots along the baseline that only separated in Solvent 2.
  • Counting 8: Including the original empty circle at the injection spot along with the 7 final grey spots.

🧠 Exam Technique

Look carefully at the key: hollow circles show intermediate spots after solvent 1; grey circles show the final positions after solvent 2. Each final resolved grey spot represents at least one distinct amino acid.

Question 09.4

Suggest why it was necessary to use two different solvents. [1 mark]

✅ Correct Answer

Either of the following points:

  • Some of the amino acids did not separate (or did not dissolve) in the first / either solvent.
  • Some amino acids have the same Rf value (or the same affinity for the stationary/mobile phase) in the first / either solvent.
1 Mark: Clear explanation that spots overlapped or failed to resolve in a single solvent.

💡 Key Knowledge

In standard 1D chromatography, two different amino acids with very similar side-chain polarities may have identical Rf values in Solvent 1 and travel together as a single spot.

By rotating 90° and running a second solvent with a different polarity, the relative solubilities and affinities change, allowing the co-eluting amino acids to separate.

❌ Common Errors (Examiner Trap!)

  • Stating merely: "Amino acids have different Rf values in different solvents." — Zero marks! (Explicitly rejected on the mark scheme because it does not explain why two were needed).
  • Saying "to make it more accurate" or "to get better results" without referencing separation, identical Rf values, or overlapping spots.

🧠 Exam Technique

Always state the problem that the second solvent solves: "In the first solvent, some amino acids have identical Rf values / do not separate." Framing your answer around solving incomplete separation ensures full credit.

Topics

Organic Chemistry · Required Practicals · 3.3.13 Amino Acids, Proteins and DNA · 3.3.16 Chromatography · Required Practical 12: Separation and purification techniques

Question and mark scheme from the AQA A-Level Chemistry examination, Paper 2, 2019. QuestionVault is an independent revision resource; questions remain the copyright of the awarding body.