AQA AS Level Biology Paper 1, November 2021: Question 5

8 marks · Medium difficulty · Short Answer

Describe how the structure of glycogen relates to its function, name the type of peptidase hydrolysing bond G, find the number of different R groups, and calculate the number of polypeptides of specific lengths from a digestion table.

Practise this question

Question

Question 05 containing four parts. Question 05.1 asks to describe how the structure of glycogen is related to its function (4 marks). Figure 5 shows a primary structure diagram of a polypeptide made of shapes representing amino acids, with bond G pointing between two amino acids. Question 05.2 asks to name the type of peptidase hydrolysing bond G (1 mark). Question 05.3 asks for the number of different R groups in Figure 5 (1 mark). Question 05.4 provides Table 1 showing lengths and numbers of polypeptides produced from a 101 amino acid polypeptide, and asks to calculate the number of polypeptides 6 amino acids and 20 amino acids in length (2 marks).
Question text

05.1 Describe how the structure of glycogen is related to its function.

[4 marks]

Figure 5 shows the primary structure of part of a polypeptide. Each shape

represents an amino acid. Identical amino acids have the same shape.

Figure 5

05.2 Name the type of peptidase which will hydrolyse the bond labelled G in Figure 5.

[1 mark]

05.3 Give the number of different R groups in the polypeptide shown in Figure 5.

[1 mark]

A scientist used an enzyme to digest a polypeptide containing 101 amino acids.

The digestion produced a range of smaller polypeptides.

The scientist determined the number of amino acids in each of the polypeptides

*10* produced. He also counted the number of polypeptides of each length.

Table 1 shows some of the scientist’s results.

Table 1

Number of amino acids in Number of polypeptides of each

polypeptide length

15 3

05.4 Use the information in Table 1 to calculate the number of polypeptides:

[2 marks]

6 amino acids in length

20 amino acids in length

Mark scheme

Show the mark scheme Mark scheme for questions 05.1 to 05.4. Question 05.1 awards up to 4 marks for points including helical/branched compact structure, polymer of glucose for easy hydrolysis, branched for more ends, provides respiratory substrate, and insoluble affecting water potential. Question 05.2 accepts endopeptidase for 1 mark. Question 05.3 accepts 3 for 1 mark. Question 05.4 accepts 2 for 6 amino acid length and 2 for 20 amino acid length, with 1 mark available for working out total amino acids.

Question Marking Guidance Mark Comments

05.1 1. Helix/coiled/branched so compact; 1. Accept description of

‘compact’, eg many

2. Polymer of glucose so easily hydrolysed; glucoses packed

closely/densely/tightly

3. Branched so more ends for faster hydrolysis;

4. Glucose (polymer) so provides respiratory

substrate for energy (release); 4 max

5. Insoluble so not (easily) lost (from cell)

OR

Insoluble so does not affect water

potential/osmosis;

05.2 Endo(peptidase); 1 Correct spelling

05.3 3; 1

1. (6 amino acids in length) 1;

05.4

Accept for 1 mark,

2. (20 amino acids in length) 2; 55 (2 5 + 3 15) if no

2 other mark awarded.

TOTAL 8

How to answer it

Biological Molecules & Enzymes Study Guide

What this question tests

This exam question evaluates your core knowledge of carbohydrate structure-function relationships (glycogen), protein primary structure interpretation, enzyme specificity (endopeptidases vs. exopeptidases), and quantitative data analysis involving peptide hydrolysis and molecular calculations.

Question 05.1 [4 marks]

Describe how the structure of glycogen is related to its function.

✅ Correct Answer / Mark Scheme

  • Compact / Branched / Coiled: Fits a large amount of glucose into a small cellular space.
  • Polymer of alpha-glucose: Easily hydrolysed to release monosaccharides.
  • Branched structure: Provides multiple terminal ends simultaneously for rapid enzyme action (faster hydrolysis).
  • Insoluble: Has no osmotic effect on the cell and cannot easily diffuse out of the cell.

💡 Key Knowledge

Glycogen is the main energy storage molecule in animals. Always link a structural feature explicitly to a functional advantage. For instance, never just state "it is branched"—you must explain that branching creates more ends for faster enzyme hydrolysis to release glucose during high respiration demand.

🧠 Exam Technique

This is a classic "structure-function" question worth up to 4 marks. Aim to make 4 distinct, paired points linking feature and function. Avoid vague statements like "it stores energy well"—specify that it provides a respiratory substrate for energy release.

❌ Common Errors

Students frequently confuse glycogen with cellulose or starch, mistakenly attributing plant-specific properties (like microfibrils or rigidity) to glycogen. Another common error is stating glycogen "is insoluble so it doesn't dissolve" without mentioning the vital consequence regarding water potential/osmosis.

Question 05.2 [1 mark]

Name the type of peptidase which will hydrolyse the bond labelled G in Figure 5.

✅ Correct Answer

Endopeptidase (accept correct phonetic spelling like endopeptidase).

💡 Key Knowledge

Endopeptidases hydrolyse peptide bonds within the central region of a polypeptide chain, producing smaller peptide fragments. Conversely, exopeptidases hydrolyse peptide bonds at the terminal ends of proteins to remove single amino acids.

Question 05.3 [1 mark]

Give the number of different R groups in the polypeptide shown in Figure 5.

✅ Correct Answer

3

💡 Key Knowledge

Figure 5 uses distinct geometric shapes (circles, triangles, squares) to represent different amino acids. Counting the unique shapes reveals how many types of monomer are present, which directly corresponds to the number of different R groups.

Question 05.4 [2 marks]

Use the information in Table 1 to calculate the number of polypeptides: 6 amino acids in length, and 20 amino acids in length.

📐 Step-by-Step Calculation

Total starting length: 101 amino acids.

Step 1: Calculate total amino acids accounted for by known rows in Table 1.

  • Length 5 polypeptides: 2 polypeptides × 5 amino acids = 10 amino acids.
  • Length 15 polypeptides: 3 polypeptides × 15 amino acids = 45 amino acids.
  • Total accounted for = 10 + 45 = 55 amino acids.

Step 2: Find remaining amino acids for lengths 6 and 20.

101 - 55 = 46 remaining amino acids.

Step 3: Solve using the remaining constraints.

We need a combination of length 6 and length 20 polypeptides that sum to 46 amino acids. Testing possible integer values for the number of length-20 polypeptides:

  • If 1 × 20-mer = 20 amino acids. Remaining = 26 (not divisible by 6).
  • If 2 × 20-mers = 40 amino acids. Remaining = 6 amino acids. This means exactly 1 × 6-mer.

Final Answers:

  • 6 amino acids in length = 1
  • 20 amino acids in length = 2

❌ Common Calculation Traps & Partial Marks

Students often forget to multiply the number of amino acids per peptide by the frequency of polypeptides given in the table. If you correctly calculated total amino acids accounted for (55) but couldn't solve the final split, the mark scheme awards 1 mark as a consolation for showing working (2 × 5 + 3 × 15) .

Topics

Biology · 3.1 Biological molecules

Question and mark scheme from the AQA AS Level Biology examination, Paper 1, November 2021. QuestionVault is an independent revision resource; questions remain the copyright of the awarding body.