AQA GCSE Combined Science: Trilogy Biology Paper 2 (Higher), 2018: Question 3

8 marks · Standard Demand difficulty · Extended Answer

Identify why cave microorganisms are extremophiles, use enzyme activity graphs to determine which enzyme is from the cave microorganism and justify the choice, then describe the three-domain classification system and suggest why most cave microorganisms belong to Archaea.

Practise this question

Question

The question page describes microorganisms removed from rocks in caves in Mexico, trapped there for 10,000 to 50,000 years in dark, very hot, humid and acidic conditions. Part 03.1 is a 2-mark tick-two-box multiple-choice question asking why they are called extremophiles, with options including surviving in high humidity, high temperatures, the dark, inside rocks, and where it is acidic. Figure 2 contains two line graphs of enzyme activity: one against temperature from about 20 to 70 degrees C and one against pH from 2 to 10, each showing curves for enzymes A, B, C and D; C peaks at high temperature around 65 degrees C and low pH around 3. Further parts ask which enzyme comes from the cave microorganism, ask for reasons, ask for a 3-mark description of Carl Woese's three-domain classification system, and finally ask why most cave microorganisms were classified in the Archaea domain.
Question text

03 Scientists have removed microorganisms from inside rocks in caves in Mexico.

The microorganisms have been trapped there for between 10 000 and 50 000 years.

The caves are dark, very hot, humid and acidic.

03.1 Why are these microorganisms called extremophiles?

[2 marks]

Tick two boxes.

They are thousands of years old

They survive in high humidity

They survive in high temperatures

They survive in the dark

They survive inside rocks

They survive where it is acidic 8

The microorganisms have been inactive for thousands of years but the scientists have

reactivated them.

Figure 2 shows the results of enzyme analysis on four enzymes, A, B, C and D.

Three of the enzymes were from microorganisms found in the soil near the caves.

One of the enzymes was from a reactivated microorganism from the caves.

Figure 2

03.2 Which enzyme comes from the microorganism from the caves?

*07* [1 mark]

Tick one box.

A B C D

03.3 Give the reasons for your answer to question 03.2

[1 mark]

03.4 Carl Woese developed the ‘three-domain system’ of classification.

Describe the ‘three-domain system’ of classification.

[3 marks]

03.5 Most of the microorganisms from the caves were classified as belonging to the

Archaea domain of the ‘three-domain system’.

Suggest why.

[1 mark]

Mark scheme

Show the mark scheme The mark scheme is a table with rows for questions 03.1 to 03.5 and a total of 8 marks. For 03.1, the correct ticks are surviving in high temperatures and surviving where it is acidic; for 03.2, the correct enzyme is C; for 03.3, the reason is that C has high or optimum activity at high temperature, about 65 degrees C, and low pH around 3, with allowance for identifying it as the only enzyme active between about 55 and 75 degrees C or below pH 4. For 03.4, any three marks are awarded for describing the three-domain system as based on DNA or chemical evidence and naming or describing Archaea, Bacteria or Prokaryota, and Eukaryota including plants and animals or organisms with a nucleus; for 03.5, the accepted idea is that these microorganisms live in extreme conditions or are extremophiles.

AO /

Question Answers Extra information Mark

Spec. Ref.

03.1 they survive in high 1 AO2

temperatures 4.7.1.4

they survive where it is acidic 1

03.2 C 1 AO3

4.7.1.4

03.3 mark dependent on C correct for AO2

question 03.2 4.7.1.4

because it has (high / optimum) allow it is the only enzyme that 1

activity at high temperature or is active between 55 °C and

65 °C and / or low pH or pH 3 or 75 °C and / or below pH4

high acidity

03.4 any three from: 3 AO1

• based on DNA / chemical 4.6.4

evidence

(the three domains are)

• (Archaea) –primitive / simple

bacteria

• Prokaryota / Bacteria – true /

modern bacteria

• Eukaryota – includes allow Eukaryota - includes

(protists, fungi,) plants and organisms with cells having a

animals nucleus

if no other mark awarded

allow for 1 mark mention of

Archaea, Prokaryota / Bacteria

and Eukaryota

or

three correct descriptions

03.5 (these microorganisms) live in allow (most Archaea) are 1 AO2

extreme conditions extremophiles 4.6.4

Total 8

How to answer it

Extremophiles in caves: enzymes, domains and adaptation

AQA GCSE Combined Science: Trilogy

What this question tests

You need to identify extreme conditions, read graphs of enzyme activity against temperature and pH, choose the best enzyme from evidence, and describe the three-domain classification system. Full marks come from using the graph correctly and giving precise biology terms.

Question 03.1 – Tick two boxes

Why are these microorganisms called extremophiles?

✅ Correct answers

Tick:

  • They survive in high temperatures
  • They survive where it is acidic
1 mark for each correct tick.

💡 Key knowledge

  • “Extremophiles” are organisms that live in extreme conditions.
  • The question stem says the caves are very hot and acidic, so those are the clues.
  • Being dark, humid, or inside rocks does not make an organism an extremophile by itself.

🧠 Exam technique

  • Always match your ticks to the environment described in the question.
  • Only tick options that are extreme conditions, not just facts about where the organism is found.

❌ Common errors

  • Ticking “they survive in the dark” because the caves are dark.
  • Ticking “they survive in high humidity” because the cave is humid.
  • Thinking “old age” is why they are extremophiles.
Question 03.2 – One box

Which enzyme comes from the microorganism from the caves?

✅ Correct answer

C

1 mark for the correct letter.

💡 Key knowledge

  • The cave microorganism was reactivated from an environment that is hot and acidic.
  • On the graphs, enzyme C has its optimum at about 65 °C and works at low pH around pH 3.
  • That makes it the best match for an extremophile living in hot, acidic caves.

🧠 Exam technique

  • Use both graphs if needed, but here the key clue is the cave conditions.
  • Look for the enzyme with the highest activity at high temperature and low pH.

❌ Common errors

  • Choosing A because it has a high peak, but forgetting it is best at a much lower temperature.
  • Choosing B because it has a broad peak, but its optimum pH is not acidic.
  • Ignoring the cave conditions.
Question 03.3 – Explain your choice

Give the reasons for your answer to question 03.2

✅ Correct answer

It has high/optimum activity at high temperature or about 65 °C and low pH or about pH 3.

Acceptable alternative: it is the only enzyme active between 55 °C and 75 °C and/or below pH 4.

1 mark. This mark depends on 03.2 being correct.

💡 Key knowledge

  • An enzyme works best at its optimum temperature and optimum pH.
  • For this microorganism, the right enzyme must suit hot and acidic conditions.
  • Phrase your answer using the graph values: 65 °C, pH 3, or the ranges given in the mark scheme.

🧠 Exam technique

  • To get the mark, you must state the evidence from the graph.
  • Good answers link condition → graph feature → conclusion.
  • Example: “C is best because it has its optimum at 65 °C and pH 3, matching the hot acidic cave environment.”

❌ Common errors

  • Just writing “because it is an extremophile enzyme” with no graph evidence.
  • Giving only the temperature or only the pH.
  • Mixing up optimum with minimum.
Question 03.4 – 3 marks

Describe the three-domain system of classification

✅ Correct answer

  • The three domains are Archaea, Prokaryota/Bacteria, and Eukaryota.
  • They are based on DNA or other chemical evidence.
  • Archaea are primitive/simple bacteria.
  • Prokaryota/Bacteria are true/modern bacteria.
  • Eukaryota include organisms with cells that have a nucleus and include plants, animals, fungi and protists.
Any three correct points = 3 marks.

💡 Key knowledge

  • Carl Woese used molecular evidence, especially DNA, to split life into three domains.
  • This is different from older systems that grouped organisms in simpler ways.
  • The key idea is that classification is based on relationships shown by DNA, not just appearance.

🧠 Exam technique

  • For 3-mark describe questions, give three separate facts.
  • Use the names of the domains correctly and add one short description for each.
  • If you cannot remember the details, at least naming all three domains can gain some credit.

❌ Common errors

  • Writing only kingdoms instead of domains.
  • Forgetting that Eukaryota have a nucleus.
  • Not mentioning that the system is based on DNA/chemical evidence.
Question 03.5 – 1 mark

Suggest why most of the cave microorganisms were classified as Archaea

✅ Correct answer

They live in extreme conditions.

Acceptable: most Archaea are extremophiles.

1 mark for the idea of extreme conditions.

💡 Key knowledge

  • Archaea are commonly associated with extreme environments such as very hot, acidic, or salty habitats.
  • The cave conditions described are hot and acidic, so this is a good match.

🧠 Exam technique

  • Use the wording from the question: extreme conditions.
  • Short 1-mark questions usually need one clear point only.

❌ Common errors

  • Repeating that they were found in caves without explaining why that matters.
  • Saying “they are old” instead of linking to their environment.
  • Confusing Archaea with bacteria.
Examiner insight

What separated full marks from lower scores?

💡 Top-level responses

  • Used the graph evidence precisely for Q03.2 and Q03.3.
  • Linked hot + acidic cave conditions to extremophiles.
  • Named all three domains and included the DNA-based nature of the system.

❌ Where students lost marks

  • Ticking environmental facts that were not actually extreme.
  • Choosing an enzyme by “looks” instead of by temperature and pH optimum.
  • Giving vague classification answers like “there are different groups” without specific domain names.

📐 Quick graph-reading steps

  1. Read the question stem: hot, humid, acidic.
  2. Identify the enzyme with the highest activity at high temperature.
  3. Check which enzyme also works at low pH.
  4. Use the exact graph evidence in your explanation.

Topics

Biology · B6: Inheritance, Variation and Evolution

Question and mark scheme from the AQA GCSE Combined Science: Trilogy examination, Biology Paper 2 (Higher), 2018. QuestionVault is an independent revision resource; questions remain the copyright of the awarding body.